Канал: Farhan Haq

ExpressionProfiler: Integrative Genomic and Transcriptomic Pipeline

ExpressionProfiler: Integrative Genomic and Transcriptomic Pipeline

Driving in islamabad the beautiful - #dilldillpakistan #music #rain #weather #clouds #scenery #driv

Driving in islamabad the beautiful - #dilldillpakistan #music #rain #weather #clouds #scenery #driv

miRNA expression analysis using R - Step by step guide

miRNA expression analysis using R - Step by step guide

#khunjrabpass #hunza #hunzavalley #gilgitbaltistan #Pakistan #tour #tourism

#khunjrabpass #hunza #hunzavalley #gilgitbaltistan #Pakistan #tour #tourism

babusar top #chillas #naran #gilgitbaltistan #kaghan #pakistan

babusar top #chillas #naran #gilgitbaltistan #kaghan #pakistan

Download Gene Sequence Using Python -

Download Gene Sequence Using Python -

#jgiconsulting #budgets #finances #expensetrends #trackers #dashboards #data #insights #startups

#jgiconsulting #budgets #finances #expensetrends #trackers #dashboards #data #insights #startups

Close up of Masjid Al Haram #kaba #mecca #beautiful #subhanallah

Close up of Masjid Al Haram #kaba #mecca #beautiful #subhanallah

Flurries #sweden #lund #winter #shorts #love #snow #snowfall

Flurries #sweden #lund #winter #shorts #love #snow #snowfall

#muharram #knowledge #religion #islam #islamic Important dates in Islamic History

#muharram #knowledge #religion #islam #islamic Important dates in Islamic History

Read file in python using function - Code in description

Read file in python using function - Code in description

#eidmiladunnabi #gumbadekhazra #masjidnabawi

#eidmiladunnabi #gumbadekhazra #masjidnabawi

Infront of Kaba - Masjid Al Haram #hajj2024 #mecca #Kaba

Infront of Kaba - Masjid Al Haram #hajj2024 #mecca #Kaba

Masjid Al Haram at Night #hajj #mecca #love #travel

Masjid Al Haram at Night #hajj #mecca #love #travel

View from mina #hajj2024 #mecca #beautiful

View from mina #hajj2024 #mecca #beautiful

Kaaba - hajra aswad - rukn e yamani - Bait ul-Allah - Maqam e Ibrahim #hajj2024 #mecca #religion

Kaaba - hajra aswad - rukn e yamani - Bait ul-Allah - Maqam e Ibrahim #hajj2024 #mecca #religion

Azan live from Masjid Al Haram #hajj2024 #beautiful #religion #azan

Azan live from Masjid Al Haram #hajj2024 #beautiful #religion #azan

Thousands of pilgrims heading towards Masjid Al Haram - #religion #hajj2024 #talbiya

Thousands of pilgrims heading towards Masjid Al Haram - #religion #hajj2024 #talbiya

Tawaf - Masjid al-Haram #religion #talbiya #labbaik #hajj2024 #islam

Tawaf - Masjid al-Haram #religion #talbiya #labbaik #hajj2024 #islam

Today in Al Haram, Kaba #religion #talbiya #hajj2024

Today in Al Haram, Kaba #religion #talbiya #hajj2024

#Makkah #Desert #hajj2024 #Camel

#Makkah #Desert #hajj2024 #Camel

Reading File In Python - File Handling - L7

Reading File In Python - File Handling - L7

Python in Bioinformatics - L6 - Sequences

Python in Bioinformatics - L6 - Sequences

Python in Bioinformatics - L5 - if else elif Nested

Python in Bioinformatics - L5 - if else elif Nested

Python in Bioinformatics - L4 - Logical and Comparison Operators

Python in Bioinformatics - L4 - Logical and Comparison Operators

Python in Bioinformatics - L3 - Expressions

Python in Bioinformatics - L3 - Expressions

Python in Bioinformatics - L2 - Datatypes and Variables

Python in Bioinformatics - L2 - Datatypes and Variables

Python Basics - Installing Anaconda - Lecture 1

Python Basics - Installing Anaconda - Lecture 1

R and R studio installation - Simple Guide

R and R studio installation - Simple Guide

Correlation with R - simplest tutorial

Correlation with R - simplest tutorial

How to find gene information against a specific probe ID?

How to find gene information against a specific probe ID?

How to read large text file in windows ?

How to read large text file in windows ?

JGI Consulting #research #finance #hr

JGI Consulting #research #finance #hr

Tax Return Deadline! #JGI #finance #shorts #managment

Tax Return Deadline! #JGI #finance #shorts #managment

heatmap in Rstudio #coding

heatmap in Rstudio #coding

Simple Heatmap in R

Simple Heatmap in R

Protein Modeling #modeling #protein

Protein Modeling #modeling #protein

Introducing JGI Consulting #shorts

Introducing JGI Consulting #shorts

Annotating reference genome for WGS analysis - Step 4 #shorts #genome

Annotating reference genome for WGS analysis - Step 4 #shorts #genome

Gene Set Enrichment Analysis . Simplest guide for biologists

Gene Set Enrichment Analysis . Simplest guide for biologists

FASTQ to SAM - WGS Analysis - Step 5

FASTQ to SAM - WGS Analysis - Step 5

Annotating reference genome for WGS analysis - Step 4

Annotating reference genome for WGS analysis - Step 4

Download reference genome files for WGS analysis - Step 3

Download reference genome files for WGS analysis - Step 3

Fastqc - Whole genome sequencing - Step 2

Fastqc - Whole genome sequencing - Step 2

Download Fastq or SRA files - Whole Genome Sequencing Analysis. Step 1

Download Fastq or SRA files - Whole Genome Sequencing Analysis. Step 1

Microarray expression analysis guide for biologists - Very easy and free software -TAC

Microarray expression analysis guide for biologists - Very easy and free software -TAC

How to use grep function in linux - Guide for beginners

How to use grep function in linux - Guide for beginners

How to make a matrix file for differential expression analysis - Ubuntu

How to make a matrix file for differential expression analysis - Ubuntu

How to generate simple Heatmap - R Tutorials

How to generate simple Heatmap - R Tutorials

Downloading sequencing data on ubuntu/linux - SRA toolkit

Downloading sequencing data on ubuntu/linux - SRA toolkit

Caculate gene expression with FeatureCounts - Step 7

Caculate gene expression with FeatureCounts - Step 7

Indexing BAM file using samtools - Step 6

Indexing BAM file using samtools - Step 6

FastQ to BAM - Align reads to the reference genome with STAR - Step 5

FastQ to BAM - Align reads to the reference genome with STAR - Step 5

Trimming of FastQ file (Trimmomatic) - Step 4

Trimming of FastQ file (Trimmomatic) - Step 4

FASTQ quality check (FastQC) - Step 3

FASTQ quality check (FastQC) - Step 3

How to access a USB flash drive from the terminal?

How to access a USB flash drive from the terminal?

Converting SRA into FASTQ file - SRA Tool kit - Step 2

Converting SRA into FASTQ file - SRA Tool kit - Step 2

Downloading sequencing data on windows - SRA Tool kit - Step 1

Downloading sequencing data on windows - SRA Tool kit - Step 1

Copy Number Variation Analysis using GISTIC - Tutorial

Copy Number Variation Analysis using GISTIC - Tutorial

Microarray Normalization and Differential Expression using R

Microarray Normalization and Differential Expression using R

Microarray data normalization and annotation - R tutorial

Microarray data normalization and annotation - R tutorial

Likelihood Ratio Test using R - Part 2

Likelihood Ratio Test using R - Part 2

Cancer Informatics - An introduction

Cancer Informatics - An introduction

Likelihood Ratio Test using R - Part 1

Likelihood Ratio Test using R - Part 1

Random Forest - Feature Selection Method - R tutorial

Random Forest - Feature Selection Method - R tutorial

Convert a Character Object to Integer in R - Tutorial for Beginners

Convert a Character Object to Integer in R - Tutorial for Beginners

How to read CSV and tabular files in R - Tutorial for beginners

How to read CSV and tabular files in R - Tutorial for beginners

Cox Proportional Hazard Model - R tutorial for Beginners

Cox Proportional Hazard Model - R tutorial for Beginners

Survival Analysis using R - Tutorial for beginners

Survival Analysis using R - Tutorial for beginners

Genome wide Methylation Analysis using R - Champ Tutorial

Genome wide Methylation Analysis using R - Champ Tutorial

The Chip Analysis Methylation Pipeline using R - Installation

The Chip Analysis Methylation Pipeline using R - Installation

How to generate consensus sequence - SeaView Software

How to generate consensus sequence - SeaView Software

Finding Best Substitution Model for Phylogenetic Analysis - MEGA tutorial

Finding Best Substitution Model for Phylogenetic Analysis - MEGA tutorial

QuickBooks Accountant - How to Record a Sales Receipt. (Lecture # 5)

QuickBooks Accountant - How to Record a Sales Receipt. (Lecture # 5)

QuickBooks Accountant - Create New Invoice - (Lecture # 4)

QuickBooks Accountant - Create New Invoice - (Lecture # 4)

QuickBooks Accountant - Adding New Customer in an Invoice - (Lecture # 3)

QuickBooks Accountant - Adding New Customer in an Invoice - (Lecture # 3)

QuickBooks Accountant - Create New Invoice - (Lecture # 2)

QuickBooks Accountant - Create New Invoice - (Lecture # 2)

QuickBooks Accountant - An Overview (Lecture # 1)

QuickBooks Accountant - An Overview (Lecture # 1)

Phylogenetics - Maximum Likelihood Method

Phylogenetics - Maximum Likelihood Method

Kruskal Wallis test using IBM SPSS - Tutorial for beginners

Kruskal Wallis test using IBM SPSS - Tutorial for beginners

Normal QQ Plots using R - Tutorial for beginners

Normal QQ Plots using R - Tutorial for beginners

Boxplot using R - Tutorial for beginners

Boxplot using R - Tutorial for beginners

Histogram using R - Tutorial for Beginners

Histogram using R - Tutorial for Beginners

Stripchart using R - Tutorial for beginners

Stripchart using R - Tutorial for beginners

Linear Regression using R - Tutorial for beginners

Linear Regression using R - Tutorial for beginners

EdgeR - Differential Gene Expression Analysis using RNA-seq data - R Tutorial

EdgeR - Differential Gene Expression Analysis using RNA-seq data - R Tutorial

DeSeq - Differential Gene Expression Analysis on RNA-seq data - R Tutorial

DeSeq - Differential Gene Expression Analysis on RNA-seq data - R Tutorial

Microarray Data Analysis using R - RMA Normalization and Annotation - tutorial

Microarray Data Analysis using R - RMA Normalization and Annotation - tutorial

One way ANOVA using SPSS (Analysis of Variance)

One way ANOVA using SPSS (Analysis of Variance)

How to download and use Genomic and Pharmacological Data of Cancer Cell line Encyclopedia

How to download and use Genomic and Pharmacological Data of Cancer Cell line Encyclopedia

Simple SPSS tutorial - Easy guide for beginners

Simple SPSS tutorial - Easy guide for beginners

How to install and use Zotero for reference citations - simple and quick guide

How to install and use Zotero for reference citations - simple and quick guide

JGI Online Academy for Bioinformatics

JGI Online Academy for Bioinformatics

I-Tasser - Protein 3D Structure Prediction- Threading Method - Tutorial

I-Tasser - Protein 3D Structure Prediction- Threading Method - Tutorial

Factor Analysis using SPSS - Principal Component Analysis (PCA)

Factor Analysis using SPSS - Principal Component Analysis (PCA)

How to run MATLAB and import files - MATLAB basics

How to run MATLAB and import files - MATLAB basics

Phylogenetic Tree Topology - Gene species tree reconciliation

Phylogenetic Tree Topology - Gene species tree reconciliation

Basics of Phylogenetics - Gene duplication and Speciation

Basics of Phylogenetics - Gene duplication and Speciation

Autodock Vina Tutorial - Molecular Docking

Autodock Vina Tutorial - Molecular Docking

Protein Protein Interaction and Functional Analysis using String database

Protein Protein Interaction and Functional Analysis using String database

Introduction to Bioinformatics: FASTA Algorithm - Heuristic Alignment

Introduction to Bioinformatics: FASTA Algorithm - Heuristic Alignment

How to access publicly available microarray or high-throughput sequencing data from ArrayExpress?

How to access publicly available microarray or high-throughput sequencing data from ArrayExpress?

Homology modeling using Modeller - Tutorial for beginners (Part 2)

Homology modeling using Modeller - Tutorial for beginners (Part 2)

Homology modeling using Modeller - Tutorial for beginners (Part 1)

Homology modeling using Modeller - Tutorial for beginners (Part 1)

How to install and use Ligplot plus for receptor ligand interactions (Simple tutorial)

How to install and use Ligplot plus for receptor ligand interactions (Simple tutorial)

How to install and use PyMol on windows

How to install and use PyMol on windows

Installing CIRCOS in Linux/Ubuntu

Installing CIRCOS in Linux/Ubuntu

Cox Regression Survival Analysis - IBM SPSS

Cox Regression Survival Analysis - IBM SPSS

PAM and BLOSUM substitution matrices - Concepts

PAM and BLOSUM substitution matrices - Concepts

How to predict secondary structure of a protein using PSIPRED (Tutorial)

How to predict secondary structure of a protein using PSIPRED (Tutorial)

Multiple Sequence Alignment and phylogenetic tree using Clustal Omega (Tutorial)

Multiple Sequence Alignment and phylogenetic tree using Clustal Omega (Tutorial)

Insilico PCR Analysis to check primer's specificity (Tutorial)

Insilico PCR Analysis to check primer's specificity (Tutorial)

How to find Single Nucleotide Polymorphism (SNPs) for a specific gene or region

How to find Single Nucleotide Polymorphism (SNPs) for a specific gene or region

Introduction to Bioinformatics - Needleman Wunsch Algorithm

Introduction to Bioinformatics - Needleman Wunsch Algorithm

Introduction to Bioinformatics - Regular Expression (Lecture 10)

Introduction to Bioinformatics - Regular Expression (Lecture 10)

Introduction to Bioinformatics - Dot plot for comparing two sequences

Introduction to Bioinformatics - Dot plot for comparing two sequences

Introduction to Bioinformatics - Sequence Conservation and Analysis (lecture 9)

Introduction to Bioinformatics - Sequence Conservation and Analysis (lecture 9)

Pairwise sequence alignment - Concepts

Pairwise sequence alignment - Concepts

How to convert fasta format into nexus format

How to convert fasta format into nexus format

Introduction to Bioinformatics - Structure and Function Databases (Lecture 8)

Introduction to Bioinformatics - Structure and Function Databases (Lecture 8)

Introduction to Bioinformatics - Primary and Secondary Databases (Lecture 7)

Introduction to Bioinformatics - Primary and Secondary Databases (Lecture 7)

Introduction to Bioinformatics - Why database is important in biology ? Lecture 6

Introduction to Bioinformatics - Why database is important in biology ? Lecture 6

How to perform BLAST using NCBI

How to perform BLAST using NCBI

Introduction to Bioinformatics - Biological databases

Introduction to Bioinformatics - Biological databases

How to download protein sequence from NCBI - Tutorial

How to download protein sequence from NCBI - Tutorial

How to download gene sequence from NCBI - Tutorial

How to download gene sequence from NCBI - Tutorial

Introduction to Bioinformatics - Synteny between Human Mouse and Fish Genomes (Lecture 5)

Introduction to Bioinformatics - Synteny between Human Mouse and Fish Genomes (Lecture 5)

Introduction to Bioinformatics - Mouse Genome (Lecture 4)

Introduction to Bioinformatics - Mouse Genome (Lecture 4)

Introduction to Bioinformatics - Human Genome Project (Lecture 3)

Introduction to Bioinformatics - Human Genome Project (Lecture 3)

Introduction to Bioinformatics - Importance of informatics in biology (Lecture 2)

Introduction to Bioinformatics - Importance of informatics in biology (Lecture 2)

Introduction to Bioinformatics - (Lecture 1)

Introduction to Bioinformatics - (Lecture 1)

Introduction to Bioinformatics - definition and history (Lecture 1)

Introduction to Bioinformatics - definition and history (Lecture 1)

Farhan Haq Live Stream

Farhan Haq Live Stream

Farhan Haq Live Stream

Farhan Haq Live Stream

Hidden Markov Model in Bioinformatics (Part 2)

Hidden Markov Model in Bioinformatics (Part 2)

Hidden Markov Model in Bioinformatics - HMM (Part 1)

Hidden Markov Model in Bioinformatics - HMM (Part 1)

Overlap Matches using pairwise alignment algorithm (Part 1)

Overlap Matches using pairwise alignment algorithm (Part 1)

Overlap Matches using pairwise alignment algorithm (Part 2)

Overlap Matches using pairwise alignment algorithm (Part 2)

Linear Regression Analysis (Example coronavirus incidence)

Linear Regression Analysis (Example coronavirus incidence)

Finding Repeated Matches - Pairwise Alignment using BLOSUM Substitution Matrix

Finding Repeated Matches - Pairwise Alignment using BLOSUM Substitution Matrix

BEAST Software - Bayesian Phylogenetics analysis - Simplest guide for beginners

BEAST Software - Bayesian Phylogenetics analysis - Simplest guide for beginners

How to install BEAST Software - Bayesian Phylogenetics analysis

How to install BEAST Software - Bayesian Phylogenetics analysis

Evolution - The Diversity of Life

Evolution - The Diversity of Life

Phylogenetics Part 3 - Steps in building a phylogenetic tree

Phylogenetics Part 3 - Steps in building a phylogenetic tree

Phylogenetics Part 2 - Concepts and tree topologies

Phylogenetics Part 2 - Concepts and tree topologies

Phylogenetics Part 1 - SARS, COVID-19 and MERS case studies

Phylogenetics Part 1 - SARS, COVID-19 and MERS case studies

Phylogenetics Part 5 - Maximum Parsimony and Maximum Likelihood methods

Phylogenetics Part 5 - Maximum Parsimony and Maximum Likelihood methods

Phylogenetics Part 4 - Neighbor Joining Method

Phylogenetics Part 4 - Neighbor Joining Method

Nussinov Algorithm in bioinformatics - RNA Secondary Structure Prediction

Nussinov Algorithm in bioinformatics - RNA Secondary Structure Prediction

BRB Array Tool - Gene expression analysis (Part 2)

BRB Array Tool - Gene expression analysis (Part 2)

BRB Array Tool - Gene expression analysis (Part 1)

BRB Array Tool - Gene expression analysis (Part 1)

How to access publicly available microarray or high-throughput sequencing data (GEO)

How to access publicly available microarray or high-throughput sequencing data (GEO)

How to install BRB-Array Tool for Big Data Analysis - Tutorial for beginners

How to install BRB-Array Tool for Big Data Analysis - Tutorial for beginners

Kaplan Meier Survival Analysis

Kaplan Meier Survival Analysis

A User-Friendly Guide for Analyzing Big Data of Cancer Genomics

A User-Friendly Guide for Analyzing Big Data of Cancer Genomics

Cancer Genomics (Part 3): Easy guide to access RNA sequencing data of cancer (Example: Cbioportal)

Cancer Genomics (Part 3): Easy guide to access RNA sequencing data of cancer (Example: Cbioportal)

How to create Gantt Chart in excel? Easy guide

How to create Gantt Chart in excel? Easy guide

Survival Analysis - Epidemiology

Survival Analysis - Epidemiology

Cancer Genomics - Types of NGS techniques (Part 2)

Cancer Genomics - Types of NGS techniques (Part 2)

Cancer Genomics - Data science (Part 1)

Cancer Genomics - Data science (Part 1)

Multiple Sequence Alignment and Phylogenetic Tree Building using MEGA Software - Tutorial

Multiple Sequence Alignment and Phylogenetic Tree Building using MEGA Software - Tutorial

How to install MEGA software for multiple sequence alignment and phylogenetic analysis (Tutorial)

How to install MEGA software for multiple sequence alignment and phylogenetic analysis (Tutorial)

Basics of Phylogenetics - How UPGMA and Neighbor Joining trees are generated?

Basics of Phylogenetics - How UPGMA and Neighbor Joining trees are generated?

Basics of Phylogenetics - How to calculate evolutionary distance

Basics of Phylogenetics - How to calculate evolutionary distance

Basics of Phylogenetics - Difference between distance and character based methods

Basics of Phylogenetics - Difference between distance and character based methods

Basics of Phylogenetics - Tree Taxonomy

Basics of Phylogenetics - Tree Taxonomy

Basics of Phylogenetics - Significance of Root in a tree

Basics of Phylogenetics - Significance of Root in a tree

Kaplan Meier Survival Analysis using SPSS (example expression dataset)

Kaplan Meier Survival Analysis using SPSS (example expression dataset)

Basics of Phylogenetics - Understanding the nomenclature and types of phylogenetic tree.

Basics of Phylogenetics - Understanding the nomenclature and types of phylogenetic tree.

Research study model: Cohort (Part 2)

Research study model: Cohort (Part 2)

Research study model: Cohort (Part 1)

Research study model: Cohort (Part 1)

Forecasting Analysis Using SPSS (Example COVID-19)

Forecasting Analysis Using SPSS (Example COVID-19)

Clinical Trial Studies

Clinical Trial Studies

Mann Whitney and Kruskal Wallis Tests using SPSS

Mann Whitney and Kruskal Wallis Tests using SPSS

Correlation Analysis using SPSS

Correlation Analysis using SPSS

Fisher or Chi Square test using SPSS

Fisher or Chi Square test using SPSS

How to view whole genome synteny using BIOMART in ENSEMBL

How to view whole genome synteny using BIOMART in ENSEMBL

How to view Synteny using ENSEMBL Genome Browser

How to view Synteny using ENSEMBL Genome Browser

How to use Biomart on Ensembl - Tutorial

How to use Biomart on Ensembl - Tutorial

SmithWaterman Algorithm (Local Alignment) Part 2 Urdu Version

SmithWaterman Algorithm (Local Alignment) Part 2 Urdu Version

SmithWaterman Algorithm (Local Alignment) Part 3 Traceback Urdu Version

SmithWaterman Algorithm (Local Alignment) Part 3 Traceback Urdu Version

SmithWaterman Algorithm (Local Alignment) Part 1 Urdu Version

SmithWaterman Algorithm (Local Alignment) Part 1 Urdu Version

Ensembl Genome Browser - Terminologies

Ensembl Genome Browser - Terminologies

Ensembl Genome Browser

Ensembl Genome Browser

BLAST and ENSEMBL Genome Browser - Tutorial for Beginners (Example)

BLAST and ENSEMBL Genome Browser - Tutorial for Beginners (Example)

BLAST and ENSEMBL Genome Browser - Tutorial for Beginners

BLAST and ENSEMBL Genome Browser - Tutorial for Beginners

Introduction to Bioinformatics - Needleman Wunsch algorithm Traceback - Part 4 (Lecture 11)

Introduction to Bioinformatics - Needleman Wunsch algorithm Traceback - Part 4 (Lecture 11)

Introduction to Bioinformatics - Needleman Wunsch algorithm - Part 3 (Lecture 11)

Introduction to Bioinformatics - Needleman Wunsch algorithm - Part 3 (Lecture 11)

Introduction to Bioinformatics - Needleman Wunsch algorithm - Part 2 (Lecture 11)

Introduction to Bioinformatics - Needleman Wunsch algorithm - Part 2 (Lecture 11)

Introduction to Bioinformatics - Needleman Wunsch algorithm - Part 1 (Lecture 11)

Introduction to Bioinformatics - Needleman Wunsch algorithm - Part 1 (Lecture 11)

Lung Adenocarcinoma - Mathew Meyerson M.D, Ph.D PART 2

Lung Adenocarcinoma - Mathew Meyerson M.D, Ph.D PART 2

Lung Adenocarcinoma - Mathew Meyerson M.D, Ph.D Part 3

Lung Adenocarcinoma - Mathew Meyerson M.D, Ph.D Part 3

Lung Adenocarcinoma - Mathew Meyerson M.D, Ph.D (Part 1)

Lung Adenocarcinoma - Mathew Meyerson M.D, Ph.D (Part 1)

Local Alignment (Smith Waterman)

Local Alignment (Smith Waterman)