Канал: Barry Grant

8.2 Structural bioinformatcs (pt2)

8.2 Structural bioinformatcs (pt2)

8.1 Introduction to Structural Bioinformatics

8.1 Introduction to Structural Bioinformatics

RStudio on UCSD DataHub

RStudio on UCSD DataHub

10.2 How to install VMD on a newer Mac

10.2 How to install VMD on a newer Mac

10.1 Starting your own computer in the cloud (AWS EC2)

10.1 Starting your own computer in the cloud (AWS EC2)

9.3 Installing Bioconductor and DESeq2

9.3 Installing Bioconductor and DESeq2

9.2 Differential expression tests and pathway analysis

9.2 Differential expression tests and pathway analysis

9.1 Differential expression analysis of RNA-Seq data

9.1 Differential expression analysis of RNA-Seq data

8.4 Unix superpowers (using pipes and shh)

8.4 Unix superpowers (using pipes and shh)

8.3 Unix basics: manipulating files

8.3 Unix basics: manipulating files

8.2 Essential unix for bioinformatics II

8.2 Essential unix for bioinformatics II

8.1 Essential unix for bioinformatics 1

8.1 Essential unix for bioinformatics 1

7.0 genome informatics 1 lab live cast

7.0 genome informatics 1 lab live cast

7.3 Genome Informatics: RNASeq

7.3 Genome Informatics: RNASeq

7.1 Genome Informatics I

7.1 Genome Informatics I

6.2 Hierarchical clustering

6.2 Hierarchical clustering

6.1 Kmeans clustering

6.1 Kmeans clustering

5.2 Introduction to CRAN and Bioconductor

5.2 Introduction to CRAN and Bioconductor

3.1 Project description

3.1 Project description

TMP TEST Stream

TMP TEST Stream

0.3 Meet the team

0.3 Meet the team

Website and software setup overview

Website and software setup overview

5.1 R Functions

5.1 R Functions

4.3 Graphing with ggplot

4.3 Graphing with ggplot

4.2 Data Visualization Best Practices

4.2 Data Visualization Best Practices

4.1 Why Visualize Data?

4.1 Why Visualize Data?

4.2 Major R data structures, data types, and using functions

4.2 Major R data structures, data types, and using functions

3.1 Introduction to R and RStudio

3.1 Introduction to R and RStudio

2.4 Local alignment and database searching

2.4 Local alignment and database searching

2.3 Dynamic programing, global alignment

2.3 Dynamic programing, global alignment

2.2 Alignment dot plots

2.2 Alignment dot plots

2.1 Alignment fundamentals

2.1 Alignment fundamentals

1.2 Introduction to major bioinformatics resource providers

1.2 Introduction to major bioinformatics resource providers

1.1 What is bioinformatics?

1.1 What is bioinformatics?

1.3 Tour of major NCBI and EBI databases

1.3 Tour of major NCBI and EBI databases

Introduction to the Bioinformatics Major at UC San Diego

Introduction to the Bioinformatics Major at UC San Diego

0.3 - Meet the instructional team (Barry & Yu)

0.3 - Meet the instructional team (Barry & Yu)

0.2 - BGGN213 Website overview

0.2 - BGGN213 Website overview

0.1 BGGN213 course introduction and overview

0.1 BGGN213 course introduction and overview

0.1 BIMM143 course introduction and overview

0.1 BIMM143 course introduction and overview

9.1 Differential Expression Analysis

9.1 Differential Expression Analysis

9.2 Differential expression tests and pathway analysis

9.2 Differential expression tests and pathway analysis

Week 9 lab session stream for BIMM-143

Week 9 lab session stream for BIMM-143

9.2 Differential expression tests and pathway analysis

9.2 Differential expression tests and pathway analysis

Week 8 lab session stream for BIMM-143

Week 8 lab session stream for BIMM-143

Live Stream

Live Stream

9.1 Differential Expression Analysis

9.1 Differential Expression Analysis

8.3 RNASeq workflow basics

8.3 RNASeq workflow basics

Week 7 lab session stream for BIMM-143

Week 7 lab session stream for BIMM-143

8.1 Genome Informatics I

8.1 Genome Informatics I

Week 2 lab session stream for BIMM-143

Week 2 lab session stream for BIMM-143

Week 3 lab session stream for BIMM-143

Week 3 lab session stream for BIMM-143

Week 4 lab session stream for BIMM-143

Week 4 lab session stream for BIMM-143

Week 5 lab session stream for BIMM-143

Week 5 lab session stream for BIMM-143

5.3 RMarkdown Basics

5.3 RMarkdown Basics

6.1 Kmeans clustering

6.1 Kmeans clustering

6.2 Hierarchical clustering

6.2 Hierarchical clustering

5.2 Introduction to CRAN and Bioconductor

5.2 Introduction to CRAN and Bioconductor

6.1 R Functions

6.1 R Functions

5.3 Graphing with ggplot

5.3 Graphing with ggplot

5.2 Data Visualization Best Practices

5.2 Data Visualization Best Practices

5.1 Why Visualize Data?

5.1 Why Visualize Data?

4.1 Introduction to R RStudio

4.1 Introduction to R RStudio

4.3 Major R data structures, data types, and using functions

4.3 Major R data structures, data types, and using functions

3.3 Dynamic programing, global alignment

3.3 Dynamic programing, global alignment

3.2 Alignment dot plots

3.2 Alignment dot plots

3.1 Alignment fundamentals

3.1 Alignment fundamentals

2.1 Introduction to bioinformatics (what, where and why of bioinformatics)

2.1 Introduction to bioinformatics (what, where and why of bioinformatics)

1.3 Meet the instructional team

1.3 Meet the instructional team

1.1 BIMM143 course introduction and overview

1.1 BIMM143 course introduction and overview

2.3 A quick tour of major NCBI and EBI resources

2.3 A quick tour of major NCBI and EBI resources

2.2 Major bioinformatics resource providers (NCBI and EBI)

2.2 Major bioinformatics resource providers (NCBI and EBI)

1.2 BIMM143 website overview

1.2 BIMM143 website overview

Using Jetstream for Bioinformatics

Using Jetstream for Bioinformatics

How do we do Bioinformatics?

How do we do Bioinformatics?

What is Bioinformatics?

What is Bioinformatics?

Welcome to “Foundations of Bioinformatics” (BGGN-213)

Welcome to “Foundations of Bioinformatics” (BGGN-213)

Bio3D-web overview

Bio3D-web overview

BIOINF525 ScreenCast 1.1

BIOINF525 ScreenCast 1.1

Eva, Jenny and Emily

Eva, Jenny and Emily

Brian and Ali's wedding

Brian and Ali's wedding

Pele - goddess of fire

Pele - goddess of fire

Hawaii napoopoo road

Hawaii napoopoo road