This is the ninth module of the online course generated by the Collaborating Centre on Antimicrobial Resistance in Foodborne and Environmental Bacteria MEX-33 ([ Ссылка ]==) led by the Chemist Amada Vélez Méndez, General Director of Agro-Alimentary, Aquaculture and Fisheries Safety of the National Service for Agro-Alimentary Health, Safety and Quality (SENASICA) and the Chemist Mayrén Cristina Zamora Nava, Director of the National Reference Center for Pesticides and Contaminants.
The complete course will be available on the PAHO/WHO training platform and will include complementary reinforcement activities for each of the topics.
This module 9 covers: command line tools (SeqSero, SRST2 and ARIBA), platforms for querying bioinformatics tools (OmicX) and for comparison of Salmonella AMR data (Resistome Tracker) and finally the advantages and disadvantages of command line tools

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